BCH 4053 Spring 2001 Course Related Web Links


BCH 4053--General Biochemistry I--Spring 2001

Course Related Web Sites

Links will be added to this page periodically throughout the course, the most recent additions appearing first. Check this page occassionally to see what is new.

Chapter 20: Pyruvate Dehydrogenase animation; TCA Cycle Enzymes; ("Chime Square" graphic resources by Eric C. Niederhoffer, Southern Illinois University); TCA Cycle Intermediates; (Chime images of intermediates by William McClure, Carnegie Mellon University); Step by Step TCA Cycle; (Individual reactions, reaction data, and animations by Jon Maber, University of Leeds); KEGG TCA Cycle; (Metabolic Map with links to detailed enzyme information.; KEGG is Kyoto Encyclopedia of Genes and Genomes.); Boehringer Mannheim Metabolic Charts; (Enter "citrate cycle" in the keyword search blank)
Chapter 19: Glycolytic Enzymes; ("Chime Square" graphic resources by Eric C. Niederhoffer, Southern Illinois University); Glycolytic Intermediates; (Chime images of intermediates by William McClure, Carnegie Mellon University); Step by Step Glycolysis; (Individual reactions, reaction data, and animations by Jon Maber, University of Leeds); KEGG Glycolytic Pathway; (Metabolic Map with links to detailed enzyme information.; KEGG is Kyoto Encyclopedia of Genes and Genomes.); Boehringer Mannheim Metabolic Charts; (Enter "glycolysis" in the keyword search blank)
Chapter 18: Metabolic Maps
Chapter 15: Oxygen Binding Proteins Tutorial (By Frieda Reichsman); Hemoglobin Tutorial (By Eric Martz); Myoglobin structure; Deoxyhemoglobin structure (with BPG bound); Oxyhemoglobin structure; Oxy- and Deoxy- hemoglobins side by side
Chapter 14: Enzyme Nomenclature (Enzyme Commission Classification)
Chapter 12: DNA History--Search for the genetic material; DNA Double Helix ( Chime tutorial by Eric Martz, U. Mass. Click on items 3 to 6. Doesn't work well with Internet Explorer.); A, B, and Z DNA (by David Marcey, California Lutheran University)
Chapter 11: Nucleoside conformations
Chapter 9: Chime presentation of lipid bilayer and gramicidin channel (by Angel Herráez of the University of Alcalá, Spain)
Chapter 8: Lipid Structures
Chapter 7: Sugar structures; Monosaccharide Browser (by Jon Maber, University of Leeds)
Chapter 6: Kinemage program (Follow instructions to download Mage); There are also pointers to tutorials and many kinemage programs on protein structure.; Phi, Psi angles with a kinemage program (Download C1Basics.kin, then load it into the Mage program); Tutorial on protein secondary structure (from Carnegie Mellon University. Requires the Chime plugin.; Alpha helix and beta sheet tutorials (written by Frieda Reichsman); Tutorial on protein architecture (written by Frieda Reichsman and Timothy Driscoll for Lehninger, Nelson and Cox, 3rd. Edition); Unraveling the Mystery of Protein Folding (an article describing developments in the folding area, including some diseases associated with problems in folding.); Protein Structure Tutorial (by Frank Gorga, Bridgewater State College)
Chapter 5: Protein purification strategy (a java-based virtual laboratory); Protein sequencing strategy; Gen Bank; Protein Information Resource; Swiss Protein Database
Chapter 4: R,S configuration review; Amino Acid Structures; Amino Acid Identification Quiz; Amino Acid Structure Quiz; Amino Acid Titration Animations (by E. K. O'Neil and C. M. Grisham , UVa.)
Chapter 2: ice structure (You will need the Chime plug in to view this structure); pH calculation drill; Textbook website discussion of pH; Textbook website discussion of buffers

Garrett and Grisham TextbookWeb Site
Garrett and Grisham UVa Web Site: ( Lecture Slides by chapter from UVa course)
Organic Review: Virtual Textbook (by William Reusch, Michigan State University); CHM 2210 Reaction Summaries (by Martin Schwartz, Florida State University); CHM 2211 Reaction Summaries (by Martin Schwartz, Florida State University); Other organic Resources (compiled by Martin Schwartz, Florida State University)

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