BCH 4054 Spring 2001 Course Related Web Links


BCH 4054--General Biochemistry II--Spring 2001

Course Related Web Sites

Links will be added to this page periodically throughout the course, the most recent additions appearing first. Check this page occassionally to see what is new.

Chapter 32 Links: The Genetic Code; tRNA structure
Chapter 30 Links: Animations of genetic processes
Chapter 29 Links: Holliday Model--Explanation for Recombination; Holliday Junction--Strand exchange animation; Holliday Junction--RuvA and RuvB complex with DNA
Chapter 11 & 12 Links: syn- and anti- nucleoside conformations; DNA Double Helix (Chime tutorial by Eric Martz, U. Mass. Click on items 3 and 6); A, B, and Z DNA (by David Marcey, Califronia Lutheran University); DNA Supercoiling Part 1, Part 2 (Lectures by Professor Michael Blaber); DNA History--Search for the Genetic Material
Chapter 27 Links: Nucleotide metabolism (from Net Biochem); Nucleotide metabolism (from Michael W. King, Indiana University, Terre Haute Center for Medical Education)
Chapter 26 Links: Urea Cycle: 2D | 3D
Chapter 25 Links: Cholesterol Biosynthesis
Chapter 24 Links: Fatty Acid Tutorial (NetBiochem Tutorial by James Baggot and Sharon Dennis); Propionyl-CoA Degradation: 2D | 3D
Chapter 23 Links: Glucose-6-phosphate Dehydrogenase Deficiency; Pentose Phosphate Pathway: 2 D | 3 D; Glycogen Synthesis and Galactose Pathway: 2 D | 3 D
Chapter 22 Links: Photosynthesis Problem Set 1; Photosynthesis Problem Set 2 (both from The Biology Project, University of Arizona); Photosynthesis Summary (from the Biology Hyper Textbook, Experimental Study Group, MIT)

Chapter 21 Links: Electron Transport/Oxidative Phosphorylation animation

Chapter 20: Pyruvate Dehydrogenase animation; TCA Cycle Enzymes; ("Chime Square" graphic resources by Eric C. Niederhoffer, Southern Illinois University); TCA Cycle Intermediates; (Chime images of intermediates by William McClure, Carnegie Mellon University); Step by Step TCA Cycle; (Individual reactions, reaction data, and animations by Jon Maber, University of Leeds); KEGG TCA Cycle; (Metabolic Map with links to detailed enzyme information.; KEGG is Kyoto Encyclopedia of Genes and Genomes.); Boehringer Mannheim Metabolic Charts; (Enter "citrate cycle" in the keyword search blank)

Chapter 19: Glycolytic Enzymes; ("Chime Square" graphic resources by Eric C. Niederhoffer, Southern Illinois University); Glycolytic Intermediates; (Chime images of intermediates by William McClure, Carnegie Mellon University); Step by Step Glycolysis; (Individual reactions, reaction data, and animations by Jon Maber, University of Leeds); KEGG Glycolytic Pathway; (Metabolic Map with links to detailed enzyme information.; KEGG is Kyoto Encyclopedia of Genes and Genomes.); Boehringer Mannheim Metabolic Charts; (Enter "glycolysis" in the keyword search blank)

Metabolic Maps

From the Kyoto Encyclopedia of Genes and Genomes. Choose a pathway from the list, then there is a drop-down menu from which to choose an organism, and the pathway for that organism is displayed. Enzymes are indicated by their IUPAC numbers, and clicking on an enzyme number connects to a page with extensive information about the enzyme and links to protein databases. For more information, consult the instructions page for use of this information.

Boehringer Mannheim Pathways. Enter a compound name to retrieve links to pathways involving the compound.